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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANS64187.1Hypothetical protein. (529 aa)    
Predicted Functional Partners:
ANS64188.1
Hypothetical protein.
 
     0.971
ANS64186.1
Hypothetical protein.
 
    0.943
ANS64184.1
Hypothetical protein.
 
     0.760
ANS64185.1
RNA polymerase sigma factor SigK; Belongs to the sigma-70 factor family. ECF subfamily.
 
     0.719
ANS62492.1
Transposase.
  
    0.689
ANS64189.1
Serine/threonine protein kinase.
  
    0.605
ANS65433.1
Hypothetical protein.
  
     0.568
ANS69855.1
Transmembrane transport protein.
  
     0.560
secD-2
Bifunctional preprotein translocase subunit SecD/SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
 
    0.537
ANS67378.1
Hypothetical protein.
  
     0.536
Your Current Organism:
Streptomyces lincolnensis
NCBI taxonomy Id: 1915
Other names: ATCC 25466, BCRC 11173, CBS 630.70, CBS 699.69, CCRC 11173, CCRC:11173, DSM 2013, DSM 40355, IFO 13054, ISP 5355, JCM 4287, JCM 4488, KCTC 9088, KCTC 9089, NBRC 13054, NCIMB 9413, NRRL 2936, NRRL-ISP 5355, S. lincolnensis, VKM Ac-727
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.