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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANS64369.1Acetyltransferase. (156 aa)    
Predicted Functional Partners:
ANS64368.1
IclR-family transcriptional regulator.
       0.878
ANS64367.1
Aldehyde dehydrogenase.
       0.736
ANS64370.1
Two-component system sensor kinase.
   
   0.703
ANS64371.1
Two-component system response regulator.
   
   0.702
ANS64366.1
Hypothetical protein.
       0.684
ANS64363.1
Protein dithiol-disulfide isomerase.
       0.567
ANS64362.1
Hypothetical protein.
       0.556
ANS64372.1
Secreted penicillin binding protein.
  
    0.550
ANS67634.1
Secreted protein.
       0.481
ANS66337.1
Hypothetical protein.
  
     0.408
Your Current Organism:
Streptomyces lincolnensis
NCBI taxonomy Id: 1915
Other names: ATCC 25466, BCRC 11173, CBS 630.70, CBS 699.69, CCRC 11173, CCRC:11173, DSM 2013, DSM 40355, IFO 13054, ISP 5355, JCM 4287, JCM 4488, KCTC 9088, KCTC 9089, NBRC 13054, NCIMB 9413, NRRL 2936, NRRL-ISP 5355, S. lincolnensis, VKM Ac-727
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