STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANS64378.1Endo-1,4-beta-xylanase. (701 aa)    
Predicted Functional Partners:
ANS64009.1
alpha-N-arabinofuranosidase.
  
 0.793
ANS63077.1
Hypothetical protein.
   
 0.772
ANS70506.1
Hypothetical protein.
   
 0.762
ANS63430.1
Hypothetical protein.
 
   
 0.748
ANS68864.1
alpha-N-arabinofuranosidase; Belongs to the glycosyl hydrolase 43 family.
   
 0.712
ANS64377.1
Secreted pectate lyase.
 
     0.704
ANS68912.1
Alpha-arabinofuranosidase II; Belongs to the glycosyl hydrolase 43 family.
   
 0.703
ANS70561.1
Hypothetical protein.
  
     0.694
ANS70512.1
Hypothetical protein; Belongs to the glycosyl hydrolase 43 family.
  
     0.685
ANS64983.1
Secreted arabinase.
  
     0.664
Your Current Organism:
Streptomyces lincolnensis
NCBI taxonomy Id: 1915
Other names: ATCC 25466, BCRC 11173, CBS 630.70, CBS 699.69, CCRC 11173, CCRC:11173, DSM 2013, DSM 40355, IFO 13054, ISP 5355, JCM 4287, JCM 4488, KCTC 9088, KCTC 9089, NBRC 13054, NCIMB 9413, NRRL 2936, NRRL-ISP 5355, S. lincolnensis, VKM Ac-727
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