STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANS64389.1Xylanase; Belongs to the glycosyl hydrolase 43 family. (505 aa)    
Predicted Functional Partners:
ANS64388.1
Pectinesterase.
 
   
 0.853
ANS64386.1
Secreted protein.
 
   
 0.837
ANS64392.1
Putative secreted pectate lyase.
 
   
 0.822
ANS64390.1
Oxidoreductase.
       0.795
ANS64391.1
Hypothetical protein.
       0.795
ANS62883.1
Hypothetical protein.
 
   
 0.770
ANS68867.1
Carbohydrate esterase family 12 protein.
 
   
 0.768
ANS64384.1
Secreted pectinesterase.
 
   
 0.760
ANS63323.1
Alpha-N-arabinofuranosidase.
 
  
 0.752
ANS64383.1
Pectinesterase.
 
   
 0.751
Your Current Organism:
Streptomyces lincolnensis
NCBI taxonomy Id: 1915
Other names: ATCC 25466, BCRC 11173, CBS 630.70, CBS 699.69, CCRC 11173, CCRC:11173, DSM 2013, DSM 40355, IFO 13054, ISP 5355, JCM 4287, JCM 4488, KCTC 9088, KCTC 9089, NBRC 13054, NCIMB 9413, NRRL 2936, NRRL-ISP 5355, S. lincolnensis, VKM Ac-727
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