Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANS65035.1Regulator of sig8. (337 aa)    
Predicted Functional Partners:
ANS65036.1
Hypothetical protein.
  
 
 0.935
ANS65037.1
Hypothetical protein.
       0.709
ANS62732.1
Putative RNA polymerase sigma factor; Belongs to the sigma-70 factor family.
  
 
 0.666
ANS70225.1
Secreted protein.
  
     0.637
ANS64772.1
Secreted protein.
  
     0.635
ANS65103.1
Hypothetical protein.
  
     0.631
ANS70203.1
Secreted protein.
  
     0.627
ANS69672.1
Secreted protein.
  
     0.626
ANS63806.1
Hypothetical protein.
 
 
 0.592
ANS62444.1
Secreted protein.
  
     0.563
Your Current Organism:
Streptomyces lincolnensis
NCBI taxonomy Id: 1915
Other names: ATCC 25466, BCRC 11173, CBS 630.70, CBS 699.69, CCRC 11173, CCRC:11173, DSM 2013, DSM 40355, IFO 13054, ISP 5355, JCM 4287, JCM 4488, KCTC 9088, KCTC 9089, NBRC 13054, NCIMB 9413, NRRL 2936, NRRL-ISP 5355, S. lincolnensis, VKM Ac-727
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