Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ANS65238.1Penicillin-binding protein. (748 aa)    
Predicted Functional Partners:
ANS65237.1
Cell cycle protein; Belongs to the SEDS family.
 
 
 0.991
ANS65240.1
Rod shape-determining protein; Involved in formation and maintenance of cell shape.
 
 
 0.980
ANS67647.1
Penicillin-binding protein.
 
 
 0.952
ANS65239.1
Rod shape-determining protein.
 
  
 0.951
ANS65241.1
Rod shape-determining protein.
 
 
 
 0.950
ANS64644.1
Cell division protein FtsI/penicillin-binding protein.
  
  
0.927
ANS64372.1
Secreted penicillin binding protein.
  
  
0.922
ANS65912.1
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
  
 
 0.920
ANS66557.1
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
  
 
 0.920
ANS67930.1
Secreted penicillin-binding protein.
  
  
0.920
Your Current Organism:
Streptomyces lincolnensis
NCBI taxonomy Id: 1915
Other names: ATCC 25466, BCRC 11173, CBS 630.70, CBS 699.69, CCRC 11173, CCRC:11173, DSM 2013, DSM 40355, IFO 13054, ISP 5355, JCM 4287, JCM 4488, KCTC 9088, KCTC 9089, NBRC 13054, NCIMB 9413, NRRL 2936, NRRL-ISP 5355, S. lincolnensis, VKM Ac-727
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