Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANS65322.1ABC transporter ATP-binding protein. (321 aa)    
Predicted Functional Partners:
ANS65320.1
Hypothetical protein.
 
 
 0.971
ANS65321.1
Hypothetical protein.
 
 
 0.967
ANS63182.1
Hypothetical protein.
  
 
 0.872
ANS68403.1
Putative ABC transport system integral membrane protein.
  
 
 0.872
ANS65319.1
Globin.
       0.696
ANS65753.1
ABC transporter integral membrane protein.
 
 
 0.591
ANS68500.1
ABC transporter ATP-binding protein.
 
    
0.580
ANS63665.1
ABC transporter integral membrane protein.
 
 
 0.560
ANS65318.1
O-methyltransferase.
       0.551
ANS62423.1
Hypothetical protein.
 
 0.519
Your Current Organism:
Streptomyces lincolnensis
NCBI taxonomy Id: 1915
Other names: ATCC 25466, BCRC 11173, CBS 630.70, CBS 699.69, CCRC 11173, CCRC:11173, DSM 2013, DSM 40355, IFO 13054, ISP 5355, JCM 4287, JCM 4488, KCTC 9088, KCTC 9089, NBRC 13054, NCIMB 9413, NRRL 2936, NRRL-ISP 5355, S. lincolnensis, VKM Ac-727
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