Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ANS65561.1Transcription regulator ArsR. (192 aa)    
Predicted Functional Partners:
ANS65559.1
ABC transporter permease protein.
       0.789
ANS65560.1
ABC transporter substrate-binding protein.
       0.789
ANS65557.1
Permease membrane component.
       0.683
ANS65556.1
Transcription regulator AsnC.
  
  
 0.679
ANS65555.1
4-hydroxyphenylpyruvate dioxygenase.
       0.634
ANS63672.1
Hypothetical protein.
  
     0.502
ANS69437.1
Hypothetical protein.
  
     0.496
ANS66809.1
LuxR family transcriptional regulator.
  
  
 0.475
ANS63742.1
Hypothetical protein.
  
     0.451
ANS70294.1
Hypothetical protein.
 
  
 0.428
Your Current Organism:
Streptomyces lincolnensis
NCBI taxonomy Id: 1915
Other names: ATCC 25466, BCRC 11173, CBS 630.70, CBS 699.69, CCRC 11173, CCRC:11173, DSM 2013, DSM 40355, IFO 13054, ISP 5355, JCM 4287, JCM 4488, KCTC 9088, KCTC 9089, NBRC 13054, NCIMB 9413, NRRL 2936, NRRL-ISP 5355, S. lincolnensis, VKM Ac-727
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