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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANS65804.1Penicillin-binding protein (secreted protein). (543 aa)    
Predicted Functional Partners:
ftsQ
Sporulation protein; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
  
 
 0.744
ANS66522.1
Cell division membrane protein; Belongs to the SEDS family.
 
 
 0.672
ANS66477.1
Secreted penicillin-binding protein.
 
 
 
 0.657
ANS67647.1
Penicillin-binding protein.
 
 
 
 0.649
ANS65237.1
Cell cycle protein; Belongs to the SEDS family.
 
 
 0.648
ANS65522.1
Penicillin-binding protein.
 
 
 
 0.642
ANS66892.1
Transpeptidase.
 
 
 
0.629
ANS67931.1
Cell division membrane protein; Belongs to the SEDS family.
 
 
 0.623
ANS65240.1
Rod shape-determining protein; Involved in formation and maintenance of cell shape.
 
 
 0.596
murE
UDP-N-acetylmuramoylalanyl-D-glutamate-2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.
 
  
 0.564
Your Current Organism:
Streptomyces lincolnensis
NCBI taxonomy Id: 1915
Other names: ATCC 25466, BCRC 11173, CBS 630.70, CBS 699.69, CCRC 11173, CCRC:11173, DSM 2013, DSM 40355, IFO 13054, ISP 5355, JCM 4287, JCM 4488, KCTC 9088, KCTC 9089, NBRC 13054, NCIMB 9413, NRRL 2936, NRRL-ISP 5355, S. lincolnensis, VKM Ac-727
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