Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ANS66301.1ABC transport protein, ATP-binding subunit. (321 aa)    
Predicted Functional Partners:
ANS66302.1
Integral membrane protein.
 
  
 0.955
ANS66304.1
Putative two-component system response regulator.
 
  
 0.689
ANS64046.1
ABC-type drug export system.
 
  
 0.640
ANS66303.1
Two-component system sensor kinase.
 
   
 0.634
ANS64449.1
ABC transporter permease protein.
 
  
 0.606
ANS64808.1
ABC transporter transmembrane protein.
 
  
 0.589
ANS62638.1
ABC transporter.
 
  
 0.569
ANS66971.1
ABC transporter transmembrane component.
 
  
 0.547
ANS66023.1
ABC transport system integral membrane protein.
 
  
 0.532
ANS66834.1
ABC transporter membrane protein.
  
 
 0.518
Your Current Organism:
Streptomyces lincolnensis
NCBI taxonomy Id: 1915
Other names: ATCC 25466, BCRC 11173, CBS 630.70, CBS 699.69, CCRC 11173, CCRC:11173, DSM 2013, DSM 40355, IFO 13054, ISP 5355, JCM 4287, JCM 4488, KCTC 9088, KCTC 9089, NBRC 13054, NCIMB 9413, NRRL 2936, NRRL-ISP 5355, S. lincolnensis, VKM Ac-727
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