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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANS66809.1LuxR family transcriptional regulator. (326 aa)    
Predicted Functional Partners:
ANS66808.1
Regulatory protein.
 
    
0.742
ANS66810.1
Hypothetical protein.
       0.708
ANS66807.1
Regulatory protein.
 
    
0.676
ANS65706.1
Hypothetical protein.
  
     0.609
ANS69352.1
Regulatory protein.
 
 
 0.596
ANS66798.1
Hypothetical protein.
       0.567
ANS69939.1
Hydrolase.
  
     0.561
ANS63727.1
Hydrolase.
  
     0.557
ANS67901.1
Hypothetical protein.
  
     0.547
ANS62693.1
LuxR family transcriptional regulator.
 
 
 0.539
Your Current Organism:
Streptomyces lincolnensis
NCBI taxonomy Id: 1915
Other names: ATCC 25466, BCRC 11173, CBS 630.70, CBS 699.69, CCRC 11173, CCRC:11173, DSM 2013, DSM 40355, IFO 13054, ISP 5355, JCM 4287, JCM 4488, KCTC 9088, KCTC 9089, NBRC 13054, NCIMB 9413, NRRL 2936, NRRL-ISP 5355, S. lincolnensis, VKM Ac-727
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.