STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptpA_1Prolyl tripeptidyl peptidase precursor. (750 aa)    
Predicted Functional Partners:
asd2
Aspartate-semialdehyde dehydrogenase 2; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
       0.683
guaB_1
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.668
ONF96555.1
Bacterial leucyl aminopeptidase precursor.
  
    0.660
btuB_5
Vitamin B12 transporter BtuB precursor.
  
     0.622
ONF97118.1
Zinc carboxypeptidase.
 
     0.580
ONF95996.1
Bacterial leucyl aminopeptidase precursor.
  
    0.574
btuB_7
Vitamin B12 transporter BtuB precursor.
  
     0.549
btuB_8
Vitamin B12 transporter BtuB precursor.
  
     0.542
ywaD
Aminopeptidase YwaD precursor.
  
    0.519
ONF96918.1
Peptidase family M28.
  
    0.506
Your Current Organism:
Sphingomonas jeddahensis
NCBI taxonomy Id: 1915074
Other names: DSM 103790, LMG 29955, LMG:29955, S. jeddahensis, Sphingomonas jeddahensis Wubbeler et al. 2017, Sphingomonas sp. G39, strain G39
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