STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
divJHistidine protein kinase DivJ. (559 aa)    
Predicted Functional Partners:
ONF95322.1
Blue-light-activated protein.
 
 0.978
ONF96246.1
Blue-light-activated protein.
 
 0.974
bfmBAB
2-oxoisovalerate dehydrogenase subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.974
luxQ
Autoinducer 2 sensor kinase/phosphatase LuxQ.
 
 0.967
cqsS
CAI-1 autoinducer sensor kinase/phosphatase CqsS.
 
 0.964
ONF97308.1
Blue-light-activated protein.
 
 
 0.944
ONF96006.1
Blue-light-activated protein.
 
 
  0.860
phoR_1
Alkaline phosphatase synthesis sensor protein PhoR.
 
 
  0.822
ONF95975.1
Hypothetical protein.
 
     0.822
ONF97087.1
Blue-light-activated protein.
 
 
  0.795
Your Current Organism:
Sphingomonas jeddahensis
NCBI taxonomy Id: 1915074
Other names: DSM 103790, LMG 29955, LMG:29955, S. jeddahensis, Sphingomonas jeddahensis Wubbeler et al. 2017, Sphingomonas sp. G39, strain G39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.