STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AXG55_00095BolA family transcriptional regulator; Belongs to the BolA/IbaG family. (101 aa)    
Predicted Functional Partners:
AXG55_08955
Glutaredoxin domain-containing protein.
 
 
 0.964
AXG55_09430
Ferritin domain-containing protein; Belongs to the Dps family.
   
    0.560
AXG55_05550
Glutamine amidotransferase type-1 domain-containing protein.
    
  0.555
AXG55_08960
Uncharacterized protein; Belongs to the BolA/IbaG family.
 
   
 0.534
sfsA
Sugar fermentation stimulation protein homolog; Belongs to the SfsA family.
 
    0.486
AXG55_00090
Uncharacterized protein.
       0.480
AXG55_06895
SpoVR family protein.
   
    0.461
AXG55_00105
Uncharacterized protein.
     
 0.454
AXG55_00110
Uncharacterized protein.
       0.422
nuoI
NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
    0.421
Your Current Organism:
Silvanigrella aquatica
NCBI taxonomy Id: 1915309
Other names: CCUG 58639, DSM 23856, Oligoflexia bacterium MWH-Nonnen-W8red, Proteobacteria bacterium Nonnen-W8red, S. aquatica, Silvanigrella aquatica Hahn et al. 2017, strain MWH-Nonnen-W8red
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.