STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AXG55_00910Nudix hydrolase domain-containing protein. (220 aa)    
Predicted Functional Partners:
AXG55_04740
MoCF_biosynth domain-containing protein; Belongs to the CinA family.
    
 0.754
AXG55_11780
Uncharacterized protein.
     
 0.707
AXG55_05190
Uncharacterized protein.
    
  0.705
AXG55_09730
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
  0.705
AXG55_00915
Uncharacterized protein.
     
 0.700
AXG55_05300
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
 0.697
AXG55_07380
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
    
  0.692
AXG55_01200
HD-GYP domain-containing protein.
    
  0.687
AXG55_10290
Uncharacterized protein.
     
 0.681
AXG55_07955
DUF4301 domain-containing protein.
 
  
 0.610
Your Current Organism:
Silvanigrella aquatica
NCBI taxonomy Id: 1915309
Other names: CCUG 58639, DSM 23856, Oligoflexia bacterium MWH-Nonnen-W8red, Proteobacteria bacterium Nonnen-W8red, S. aquatica, Silvanigrella aquatica Hahn et al. 2017, strain MWH-Nonnen-W8red
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.