STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AXG55_01450AAA_31 domain-containing protein. (275 aa)    
Predicted Functional Partners:
AXG55_00255
ParB domain-containing protein; Belongs to the ParB family.
 
 0.994
AXG55_03105
Uncharacterized protein.
    
 
 0.879
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
 
 
 0.865
AXG55_12090
Uncharacterized protein.
  
 
 
 0.659
AXG55_00140
ZnMc domain-containing protein.
    
 
 0.611
AXG55_00145
ZnMc domain-containing protein.
    
 
 0.611
AXG55_03520
Uncharacterized protein.
    
 
 0.611
AXG55_04630
ZnMc domain-containing protein.
    
 
 0.611
AXG55_06290
Uncharacterized protein.
    
 
 0.611
AXG55_06295
Uncharacterized protein.
    
 
 0.611
Your Current Organism:
Silvanigrella aquatica
NCBI taxonomy Id: 1915309
Other names: CCUG 58639, DSM 23856, Oligoflexia bacterium MWH-Nonnen-W8red, Proteobacteria bacterium Nonnen-W8red, S. aquatica, Silvanigrella aquatica Hahn et al. 2017, strain MWH-Nonnen-W8red
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.