STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AXG55_01460Uncharacterized protein. (670 aa)    
Predicted Functional Partners:
AXG55_14125
Uncharacterized protein.
    
 0.928
AXG55_01455
Uncharacterized protein.
       0.697
AXG55_10900
HPt domain-containing protein.
  
 
 0.618
AXG55_10915
Uncharacterized protein.
  
 
 0.589
AXG55_12850
Uncharacterized protein.
 
 
 
 0.579
AXG55_10920
Uncharacterized protein.
  
 
 0.577
AXG55_01085
Shikimate_dh_N domain-containing protein.
   
 0.569
AXG55_06440
ACT domain-containing protein.
   
 0.560
gatA
Glutamyl-tRNA(Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).
   
 0.547
AXG55_02260
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
  
 0.536
Your Current Organism:
Silvanigrella aquatica
NCBI taxonomy Id: 1915309
Other names: CCUG 58639, DSM 23856, Oligoflexia bacterium MWH-Nonnen-W8red, Proteobacteria bacterium Nonnen-W8red, S. aquatica, Silvanigrella aquatica Hahn et al. 2017, strain MWH-Nonnen-W8red
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.