STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AXG55_03595Uncharacterized protein; Belongs to the 'phage' integrase family. (302 aa)    
Predicted Functional Partners:
AXG55_06705
Uncharacterized protein; Belongs to the 'phage' integrase family.
  
     0.774
AXG55_11410
Uncharacterized protein; Belongs to the 'phage' integrase family.
  
     0.748
AXG55_03190
Flagellar basal body protein.
    
   0.737
AXG55_03590
3-deoxy-D-manno-octulosonic acid transferase.
       0.631
AXG55_00975
FtsK domain-containing protein.
 
   
 0.584
AXG55_00900
NADP-dependent malic enzyme.
   
 0.566
AXG55_02135
Uncharacterized protein.
   
    0.562
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.557
AXG55_03725
Uncharacterized protein.
 
  
 0.554
AXG55_11340
PTA_PTB domain-containing protein.
    
 0.547
Your Current Organism:
Silvanigrella aquatica
NCBI taxonomy Id: 1915309
Other names: CCUG 58639, DSM 23856, Oligoflexia bacterium MWH-Nonnen-W8red, Proteobacteria bacterium Nonnen-W8red, S. aquatica, Silvanigrella aquatica Hahn et al. 2017, strain MWH-Nonnen-W8red
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.