STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AXG55_04880Metallophos domain-containing protein. (385 aa)    
Predicted Functional Partners:
AXG55_03190
Flagellar basal body protein.
    
   0.784
AXG55_04885
Uncharacterized protein.
       0.773
AXG55_04890
Uncharacterized protein.
       0.773
AXG55_04895
Uncharacterized protein.
       0.773
AXG55_04900
Uncharacterized protein.
       0.773
AXG55_04905
T2SSG domain-containing protein.
       0.634
AXG55_11745
Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family.
    
   0.556
AXG55_04910
Uncharacterized protein.
       0.525
AXG55_04915
AAA domain-containing protein.
       0.508
AXG55_04930
PDZ domain-containing protein.
 
     0.456
Your Current Organism:
Silvanigrella aquatica
NCBI taxonomy Id: 1915309
Other names: CCUG 58639, DSM 23856, Oligoflexia bacterium MWH-Nonnen-W8red, Proteobacteria bacterium Nonnen-W8red, S. aquatica, Silvanigrella aquatica Hahn et al. 2017, strain MWH-Nonnen-W8red
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.