STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AXG55_05395Uncharacterized protein. (432 aa)    
Predicted Functional Partners:
AXG55_05385
Fe-S cluster assembly ATPase SufC.
 
 
 0.999
AXG55_05390
Fe-S cluster assembly protein SufB.
 
 
 0.999
AXG55_05380
SUF system NifU family Fe-S cluster assembly protein.
 
  
 0.977
AXG55_05375
Aminotran_5 domain-containing protein.
 
 
 0.962
AXG55_12175
Aminotran_5 domain-containing protein.
 
 
 0.801
AXG55_08790
Aminotran_5 domain-containing protein.
 
 
 0.758
AXG55_05400
Rieske domain-containing protein.
     
 0.730
AXG55_11205
Ricin B-type lectin domain-containing protein.
  
 
 0.695
AXG55_05405
UPF0234 protein AXG55_05405; Belongs to the UPF0234 family.
       0.637
AXG55_13700
Rhodanese domain-containing protein.
     
 0.406
Your Current Organism:
Silvanigrella aquatica
NCBI taxonomy Id: 1915309
Other names: CCUG 58639, DSM 23856, Oligoflexia bacterium MWH-Nonnen-W8red, Proteobacteria bacterium Nonnen-W8red, S. aquatica, Silvanigrella aquatica Hahn et al. 2017, strain MWH-Nonnen-W8red
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.