Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AXG55_00345 | AXG55_00665 | AXG55_00345 | AXG55_00665 | Uncharacterized protein. | Transpeptidase domain-containing protein. | 0.767 |
AXG55_00345 | AXG55_02405 | AXG55_00345 | AXG55_02405 | Uncharacterized protein. | Biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors. Belongs to the glycosyltransferase 51 family. | 0.949 |
AXG55_00345 | AXG55_07055 | AXG55_00345 | AXG55_07055 | Uncharacterized protein. | Bulb-type lectin domain-containing protein. | 0.504 |
AXG55_00345 | AXG55_09620 | AXG55_00345 | AXG55_09620 | Uncharacterized protein. | Penicillin-binding protein 2. | 0.721 |
AXG55_00345 | AXG55_10925 | AXG55_00345 | AXG55_10925 | Uncharacterized protein. | Transgly domain-containing protein. | 0.874 |
AXG55_00345 | murE | AXG55_00345 | AXG55_00340 | Uncharacterized protein. | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.989 |
AXG55_00665 | AXG55_00345 | AXG55_00665 | AXG55_00345 | Transpeptidase domain-containing protein. | Uncharacterized protein. | 0.767 |
AXG55_00665 | AXG55_02405 | AXG55_00665 | AXG55_02405 | Transpeptidase domain-containing protein. | Biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors. Belongs to the glycosyltransferase 51 family. | 0.910 |
AXG55_00665 | AXG55_07055 | AXG55_00665 | AXG55_07055 | Transpeptidase domain-containing protein. | Bulb-type lectin domain-containing protein. | 0.504 |
AXG55_00665 | AXG55_09620 | AXG55_00665 | AXG55_09620 | Transpeptidase domain-containing protein. | Penicillin-binding protein 2. | 0.715 |
AXG55_00665 | AXG55_10745 | AXG55_00665 | AXG55_10745 | Transpeptidase domain-containing protein. | Uncharacterized protein. | 0.761 |
AXG55_00665 | AXG55_10925 | AXG55_00665 | AXG55_10925 | Transpeptidase domain-containing protein. | Transgly domain-containing protein. | 0.874 |
AXG55_00665 | murE | AXG55_00665 | AXG55_00340 | Transpeptidase domain-containing protein. | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.881 |
AXG55_02405 | AXG55_00345 | AXG55_02405 | AXG55_00345 | Biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors. Belongs to the glycosyltransferase 51 family. | Uncharacterized protein. | 0.949 |
AXG55_02405 | AXG55_00665 | AXG55_02405 | AXG55_00665 | Biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors. Belongs to the glycosyltransferase 51 family. | Transpeptidase domain-containing protein. | 0.910 |
AXG55_02405 | AXG55_07055 | AXG55_02405 | AXG55_07055 | Biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors. Belongs to the glycosyltransferase 51 family. | Bulb-type lectin domain-containing protein. | 0.519 |
AXG55_02405 | AXG55_09620 | AXG55_02405 | AXG55_09620 | Biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors. Belongs to the glycosyltransferase 51 family. | Penicillin-binding protein 2. | 0.940 |
AXG55_02405 | AXG55_10745 | AXG55_02405 | AXG55_10745 | Biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors. Belongs to the glycosyltransferase 51 family. | Uncharacterized protein. | 0.953 |
AXG55_02405 | AXG55_13855 | AXG55_02405 | AXG55_13855 | Biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors. Belongs to the glycosyltransferase 51 family. | Uncharacterized protein. | 0.591 |
AXG55_02405 | murE | AXG55_02405 | AXG55_00340 | Biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors. Belongs to the glycosyltransferase 51 family. | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.755 |
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