STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AXG55_07295ZnMc domain-containing protein. (331 aa)    
Predicted Functional Partners:
AXG55_01160
Uncharacterized protein.
 
 
 0.977
AXG55_01155
P/Homo B domain-containing protein.
 
 
 0.955
AXG55_02735
P/Homo B domain-containing protein.
 
 
 0.949
AXG55_13270
P/Homo B domain-containing protein; Belongs to the peptidase S8 family.
 
 
 0.937
AXG55_11290
P/Homo B domain-containing protein.
 
 
 0.936
AXG55_13260
P/Homo B domain-containing protein.
 
 
 0.936
AXG55_13810
P/Homo B domain-containing protein; Belongs to the peptidase S8 family.
 
 
 0.934
AXG55_13800
P/Homo B domain-containing protein; Belongs to the peptidase S8 family.
 
 
 0.933
AXG55_01145
P/Homo B domain-containing protein.
 
 
 0.932
AXG55_02750
Peptidase_S8 domain-containing protein.
 
 
 0.929
Your Current Organism:
Silvanigrella aquatica
NCBI taxonomy Id: 1915309
Other names: CCUG 58639, DSM 23856, Oligoflexia bacterium MWH-Nonnen-W8red, Proteobacteria bacterium Nonnen-W8red, S. aquatica, Silvanigrella aquatica Hahn et al. 2017, strain MWH-Nonnen-W8red
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.