STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AXG55_10550Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. (290 aa)    
Predicted Functional Partners:
AXG55_10545
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 0.999
AXG55_12015
Uncharacterized protein.
  
 
 0.981
AXG55_03900
Uncharacterized protein.
   
 0.957
AXG55_07815
Uncharacterized protein.
  
 
 0.935
AXG55_11985
Glucose-1-phosphate cytidylyltransferase.
  
 
 0.901
AXG55_11840
Uncharacterized protein.
  
 
 0.879
AXG55_00370
NTP_transferase domain-containing protein.
  
 
 0.815
AXG55_06330
Undecaprenyl-phosphate glucose phosphotransferase.
  
  
 0.807
AXG55_09540
NTP_transferase domain-containing protein.
  
 
 0.738
AXG55_00295
Glycos_transf_1 domain-containing protein.
  
 
 0.729
Your Current Organism:
Silvanigrella aquatica
NCBI taxonomy Id: 1915309
Other names: CCUG 58639, DSM 23856, Oligoflexia bacterium MWH-Nonnen-W8red, Proteobacteria bacterium Nonnen-W8red, S. aquatica, Silvanigrella aquatica Hahn et al. 2017, strain MWH-Nonnen-W8red
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