STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AXG55_12955ATP-grasp domain-containing protein. (324 aa)    
Predicted Functional Partners:
AXG55_12950
Uncharacterized protein.
       0.773
AXG55_07880
Glutaredoxin domain-containing protein.
 
  
 0.708
AXG55_02075
Uncharacterized protein; Belongs to the GST superfamily.
 
  
 0.701
AXG55_07970
Glutamate--cysteine ligase.
 
  
 0.698
AXG55_10530
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
    
 0.698
murE
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.
    
  0.686
AXG55_09595
Peptidase_M1 domain-containing protein.
 
  
 0.686
AXG55_04635
Gamma-glutamyltransferase.
    
 0.670
AXG55_12770
Uncharacterized protein.
 
  
 0.670
AXG55_04520
Coproporphyrinogen oxidase.
  
   
 0.659
Your Current Organism:
Silvanigrella aquatica
NCBI taxonomy Id: 1915309
Other names: CCUG 58639, DSM 23856, Oligoflexia bacterium MWH-Nonnen-W8red, Proteobacteria bacterium Nonnen-W8red, S. aquatica, Silvanigrella aquatica Hahn et al. 2017, strain MWH-Nonnen-W8red
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.