STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AXG55_13015ABC transmembrane type-1 domain-containing protein. (284 aa)    
Predicted Functional Partners:
AXG55_13010
ABC transmembrane type-1 domain-containing protein.
 
 0.996
AXG55_05275
Oligopeptide ABC transporter ATP-binding protein OppF; Belongs to the ABC transporter superfamily.
 
 0.994
oppD
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.994
AXG55_14345
Peptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.994
AXG55_14355
Peptide ABC transporter substrate-binding protein; Belongs to the ABC transporter superfamily.
 
 0.994
AXG55_13005
SBP_bac_5 domain-containing protein.
 0.985
oppB
Oligopeptide transporter permease.
 
 0.960
metN
Methionine import ATP-binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
   
 0.938
AXG55_11175
SBP_bac_5 domain-containing protein.
 
 0.929
AXG55_11170
ABC transmembrane type-1 domain-containing protein.
  
 0.919
Your Current Organism:
Silvanigrella aquatica
NCBI taxonomy Id: 1915309
Other names: CCUG 58639, DSM 23856, Oligoflexia bacterium MWH-Nonnen-W8red, Proteobacteria bacterium Nonnen-W8red, S. aquatica, Silvanigrella aquatica Hahn et al. 2017, strain MWH-Nonnen-W8red
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.