STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AXG55_13320Aldedh domain-containing protein. (534 aa)    
Predicted Functional Partners:
AXG55_04660
Pro_dh domain-containing protein.
 0.982
AXG55_13655
Uncharacterized protein; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.870
AXG55_04015
Carrier domain-containing protein.
  
 0.867
AXG55_10420
Uncharacterized protein.
   
 0.867
AXG55_08290
Uncharacterized protein.
   
 0.860
AXG55_11210
Uncharacterized protein.
   
 0.860
AXG55_11215
Uncharacterized protein.
   
 0.860
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
  
 0.810
AXG55_00900
NADP-dependent malic enzyme.
  
 
 0.793
AXG55_07200
Bifunctional aspartate kinase/homoserine dehydrogenase I.
  
 0.776
Your Current Organism:
Silvanigrella aquatica
NCBI taxonomy Id: 1915309
Other names: CCUG 58639, DSM 23856, Oligoflexia bacterium MWH-Nonnen-W8red, Proteobacteria bacterium Nonnen-W8red, S. aquatica, Silvanigrella aquatica Hahn et al. 2017, strain MWH-Nonnen-W8red
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.