STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOY31474.1IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (266 aa)    
Predicted Functional Partners:
OOY31473.1
Serine--glyoxylate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.654
OOY32701.1
Allophanate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.638
OOY33648.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.638
OOY32164.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.638
OOY31063.1
enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.556
OOY32700.1
Allophanate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.544
OOY32870.1
Urea amidolyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.544
OOY32163.1
Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.544
OOY29930.1
Aromatic amino acid aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.500
OOY33437.1
Catechol 2,3-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.431
Your Current Organism:
Thioclava sp. F366
NCBI taxonomy Id: 1915316
Other names: T. sp. F36-6, Thioclava sp. F36-6, Thioclava sp. MCCC 1A02837
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.