STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPT80_01360Unannotated protein; Belongs to the AAA ATPase family. (514 aa)    
Predicted Functional Partners:
dnaN
Unannotated protein; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication [...]
  
 
 0.882
CPT80_06105
Unannotated protein.
 
 
 0.871
CPT80_05995
Unannotated protein; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
     
 0.815
CPT80_03405
Unannotated protein.
     
 0.813
CPT80_04370
Unannotated protein.
   
 0.812
CPT80_06025
Unannotated protein.
   
 0.812
CPT80_02845
Unannotated protein.
    
 0.733
CPT80_00965
Unannotated protein.
    
 0.733
dnaK
Unannotated protein; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 0.689
map
Unannotated protein; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
  
 0.654
Your Current Organism:
Gastranaerophilales bacterium HUM9
NCBI taxonomy Id: 1916320
Other names: C. Gastranaerophilales bacterium HUM_9, Candidatus Gastranaerophilales bacterium HUM_9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.