STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APD48199.1Resolvase; Derived by automated computational analysis using gene prediction method: Protein Homology. (155 aa)    
Predicted Functional Partners:
APD48200.1
Polynucleotidyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.956
APD48666.1
Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.773
APD47630.1
Porin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the OprB family.
  
     0.772
APD49306.1
Porin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the OprB family.
  
     0.768
APD49041.1
Porin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the OprB family.
  
     0.759
APD49519.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.716
APD48201.1
Global nitrogen regulator NtcA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.675
APD48912.1
Polysaccharide pyruvyl transferase CsaB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.674
APD47600.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.566
APD49498.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.566
Your Current Organism:
Synechococcus sp. SynAce01
NCBI taxonomy Id: 1916956
Other names: S. sp. SynAce01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.