STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APE05161.1Outer membrane lipoprotein-sorting protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (455 aa)    
Predicted Functional Partners:
APE07544.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.985
APE05162.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.947
APE05163.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.916
APE07229.1
N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.864
APE05442.1
Cell division protein FtsX; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.648
APE05479.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.648
APE07249.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.648
APE05305.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.621
APE04533.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.532
APE05443.1
Lipoprotein releasing system, ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.532
Your Current Organism:
Alteromonas sp. RW2A1
NCBI taxonomy Id: 1917158
Other names: A. sp. RW2A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.