APE06240.1 protein (Alteromonas sp. RW2A1) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Cooccurrence

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[Homology]

Score

APE06240.1

Peptide-methionine (R)-S-oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (132 aa)

Predicted Functional Partners:

APE06969.1

0.992

APE05054.1

0.990

APE07299.1

0.909

APE06235.1

0.886

APE05495.1

0.802

BM528_00290

0.770

APE04405.1

0.770

APE04827.1

0.770

APE04828.1

0.770

APE04951.1

0.770

Your Current Organism:

Alteromonas sp. RW2A1

NCBI taxonomy Id: 1917158
Other names: A. sp. RW2A1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APE04405.1	APE04827.1	BM528_00295	BM528_02780	50S ribosomal protein L33; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
APE04405.1	APE04828.1	BM528_00295	BM528_02785	50S ribosomal protein L33; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
APE04405.1	APE04951.1	BM528_00295	BM528_03510	50S ribosomal protein L33; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
APE04405.1	APE05495.1	BM528_00295	BM528_06635	50S ribosomal protein L33; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L20; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.992
APE04405.1	APE06240.1	BM528_00295	BM528_11085	50S ribosomal protein L33; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide-methionine (R)-S-oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.770
APE04405.1	BM528_00290	BM528_00295	BM528_00290	50S ribosomal protein L33; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycerol-3-phosphate cytidylyltransferase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
APE04827.1	APE04405.1	BM528_02780	BM528_00295	50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L33; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
APE04827.1	APE04828.1	BM528_02780	BM528_02785	50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
APE04827.1	APE04951.1	BM528_02780	BM528_03510	50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
APE04827.1	APE05495.1	BM528_02780	BM528_06635	50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L20; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
APE04827.1	APE06240.1	BM528_02780	BM528_11085	50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide-methionine (R)-S-oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.770
APE04827.1	BM528_00290	BM528_02780	BM528_00290	50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycerol-3-phosphate cytidylyltransferase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
APE04828.1	APE04405.1	BM528_02785	BM528_00295	50S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L33; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
APE04828.1	APE04827.1	BM528_02785	BM528_02780	50S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
APE04828.1	APE04951.1	BM528_02785	BM528_03510	50S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
APE04828.1	APE05495.1	BM528_02785	BM528_06635	50S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L20; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
APE04828.1	APE06240.1	BM528_02785	BM528_11085	50S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide-methionine (R)-S-oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.770
APE04828.1	BM528_00290	BM528_02785	BM528_00290	50S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycerol-3-phosphate cytidylyltransferase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
APE04951.1	APE04405.1	BM528_03510	BM528_00295	30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L33; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
APE04951.1	APE04827.1	BM528_03510	BM528_02780	30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996