STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APE06280.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (617 aa)    
Predicted Functional Partners:
APE06281.1
Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.951
APE06282.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.937
APE07049.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.786
APE06279.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.774
APE06283.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.769
APE06284.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.768
APE04757.1
Phosphatidylserine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.569
APE06121.1
DNA internalization-related competence protein ComEC/Rec2; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 
 0.539
APE07540.1
Potassium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.536
APE06439.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.513
Your Current Organism:
Alteromonas sp. RW2A1
NCBI taxonomy Id: 1917158
Other names: A. sp. RW2A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.