STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001957125_00113Unannotated protein. (352 aa)    
Predicted Functional Partners:
GCA_001957125_00112
Unannotated protein.
 
 0.999
GCA_001957125_02334
Unannotated protein.
 
 
 0.996
GCA_001957125_02332
Unannotated protein.
 
 0.985
GCA_001957125_02327
Unannotated protein.
 
  
 0.935
GCA_001957125_00066
Unannotated protein.
 
 
 0.900
GCA_001957125_03734
Unannotated protein.
     
 0.896
GCA_001957125_03159
Unannotated protein.
  
  
 0.852
GCA_001957125_02333
Unannotated protein.
 
  
 0.840
GCA_001957125_00940
Unannotated protein.
 
  
  0.825
GCA_001957125_02342
Unannotated protein.
     
 0.790
Your Current Organism:
Shewanella sp. UCDKL12
NCBI taxonomy Id: 1917163
Other names: S. sp. UCD-KL12, Shewanella sp. UCD-KL12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.