STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001957125_00377Unannotated protein. (1449 aa)    
Predicted Functional Partners:
GCA_001957125_01509
Unannotated protein.
 
 0.917
GCA_001957125_00755
Unannotated protein.
 
 0.908
GCA_001957125_00187
Unannotated protein.
  
 0.857
GCA_001957125_02140
Unannotated protein.
  
 0.857
GCA_001957125_03603
Unannotated protein.
  
 0.857
GCA_001957125_04147
Unannotated protein.
  
  
 0.842
GCA_001957125_00285
Unannotated protein.
 
 0.827
GCA_001957125_00351
Unannotated protein.
  
 
  0.794
GCA_001957125_00744
Unannotated protein.
  
 0.793
GCA_001957125_02207
Unannotated protein.
  
 0.793
Your Current Organism:
Shewanella sp. UCDKL12
NCBI taxonomy Id: 1917163
Other names: S. sp. UCD-KL12, Shewanella sp. UCD-KL12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.