STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001957135_00054Unannotated protein. (282 aa)    
Predicted Functional Partners:
GCA_001957135_00051
Unannotated protein.
 
     0.732
GCA_001957135_00053
Unannotated protein.
 
     0.721
GCA_001957135_00052
Unannotated protein.
 
     0.691
GCA_001957135_00655
Unannotated protein.
  
     0.685
GCA_001957135_00839
Unannotated protein.
  
     0.598
GCA_001957135_00171
Unannotated protein.
  
     0.590
GCA_001957135_03491
Unannotated protein.
  
     0.582
GCA_001957135_02859
Unannotated protein.
  
     0.568
GCA_001957135_00055
Unannotated protein.
       0.543
GCA_001957135_02111
Unannotated protein.
  
     0.539
Your Current Organism:
Shewanella sp. UCDKL21
NCBI taxonomy Id: 1917164
Other names: S. sp. UCD-KL21, Shewanella sp. UCD-KL21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.