STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001957135_00472Unannotated protein. (292 aa)    
Predicted Functional Partners:
GCA_001957135_00470
Unannotated protein.
 
 0.987
GCA_001957135_00471
Unannotated protein.
 
 0.986
GCA_001957135_03399
Unannotated protein.
  
 
 0.956
GCA_001957135_02062
Unannotated protein.
  
 
 0.955
GCA_001957135_00415
Unannotated protein.
  
 
 0.952
GCA_001957135_00912
Unannotated protein.
  
 
 0.945
GCA_001957135_02867
Unannotated protein.
     
 0.942
GCA_001957135_03854
Unannotated protein.
  
 0.941
GCA_001957135_01781
Unannotated protein.
    
 0.932
GCA_001957135_01780
Unannotated protein.
   
 
 0.923
Your Current Organism:
Shewanella sp. UCDKL21
NCBI taxonomy Id: 1917164
Other names: S. sp. UCD-KL21, Shewanella sp. UCD-KL21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.