STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001957135_01168Unannotated protein. (141 aa)    
Predicted Functional Partners:
GCA_001957135_00670
Unannotated protein.
  
 0.944
GCA_001957135_01319
Unannotated protein.
  
 
 0.929
GCA_001957135_00672
Unannotated protein.
  
 0.736
GCA_001957135_00632
Unannotated protein.
  
 
 0.719
GCA_001957135_00090
Unannotated protein.
   
 0.630
GCA_001957135_00671
Unannotated protein.
   
  0.543
GCA_001957135_01167
Unannotated protein.
       0.538
GCA_001957135_03809
Unannotated protein.
    
 0.436
GCA_001957135_00092
Unannotated protein.
  
 0.426
Your Current Organism:
Shewanella sp. UCDKL21
NCBI taxonomy Id: 1917164
Other names: S. sp. UCD-KL21, Shewanella sp. UCD-KL21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.