STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001957135_01879Unannotated protein. (230 aa)    
Predicted Functional Partners:
GCA_001957135_03854
Unannotated protein.
  
 
 0.897
GCA_001957135_00607
Unannotated protein.
   
  0.856
GCA_001957135_01586
Unannotated protein.
   
  0.856
GCA_001957135_00670
Unannotated protein.
  
 0.819
GCA_001957135_01501
Unannotated protein.
    
  0.811
GCA_001957135_01502
Unannotated protein.
    
  0.809
GCA_001957135_03102
Unannotated protein.
    
  0.804
GCA_001957135_03581
Unannotated protein.
    
  0.804
GCA_001957135_03627
Unannotated protein.
    
  0.804
GCA_001957135_00332
Unannotated protein.
   
 0.794
Your Current Organism:
Shewanella sp. UCDKL21
NCBI taxonomy Id: 1917164
Other names: S. sp. UCD-KL21, Shewanella sp. UCD-KL21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.