STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001957175_03757Unannotated protein. (242 aa)    
Predicted Functional Partners:
GCA_001957175_02942
Unannotated protein.
   
 0.872
GCA_001957175_03094
Unannotated protein.
  
 
 0.733
GCA_001957175_01308
Unannotated protein.
    
  0.732
GCA_001957175_03370
Unannotated protein.
    
  0.732
GCA_001957175_02499
Unannotated protein.
  
 
 0.653
GCA_001957175_03756
Unannotated protein.
  
    0.638
GCA_001957175_02217
Unannotated protein.
   
    0.611
GCA_001957175_03755
Unannotated protein.
       0.574
GCA_001957175_00500
Unannotated protein.
   
 
 0.559
GCA_001957175_00603
Unannotated protein.
  
  
 0.544
Your Current Organism:
Colwellia sp. UCDKL20
NCBI taxonomy Id: 1917165
Other names: C. sp. UCD-KL20, Colwellia sp. UCD-KL20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.