STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC14030.1Major membrane immunogen, membrane-anchored lipoprotein. (182 aa)    
Predicted Functional Partners:
SDC14084.1
NADH dehydrogenase.
 
  
 0.922
SDC13977.1
Thiamine biosynthesis lipoprotein.
 
   
 0.885
menA
1,4-dihydroxy-2-naphthoate octaprenyltransferase.
 
     0.865
hepS
Heptaprenyl diphosphate synthase.
 
     0.851
SDC13877.1
Hypothetical protein.
 
 
   0.843
SDC14150.1
Heptaprenyl diphosphate synthase.
 
     0.805
SDC92980.1
Hypothetical protein.
  
    0.735
SDD21204.1
1,4-dihydroxy-2-naphthoate prenyltransferase.
 
     0.731
SDD21169.1
Heptaprenyl diphosphate synthase.
 
     0.702
gshAB
Glutamate-cysteine ligase /glutathione synthase.
  
   
 0.446
Your Current Organism:
Marinilactibacillus psychrotolerans
NCBI taxonomy Id: 191770
Other names: DSM 19582, IAM 14980, JCM 21451, M. psychrotolerans, Marinilactibacillus psychrotolerans Ishikawa et al. 2003, Marinolactobacillus psychrotolerans, NBRC 100002, NCIMB 13873, NRIC 0510, strain M13-2
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