STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC08970.1Luciferase family oxidoreductase, group 1. (331 aa)    
Predicted Functional Partners:
SDC69959.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
   
 
 0.809
SDC78055.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
   
 
 0.809
SDC63965.1
FMN reductase.
 
 0.765
SDC54076.1
NitT/TauT family transport system substrate-binding protein.
  
 
 0.714
SDC53959.1
NitT/TauT family transport system permease protein.
  
 
 0.688
SDC62607.1
NAD(P)H-dependent FMN reductase.
  
 0.688
SDD01282.1
NAD(P)H-dependent FMN reductase.
  
 0.688
SDD33196.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
  
 
 0.678
SDC09039.1
DNA-3-methyladenine glycosylase III.
       0.661
SDC08912.1
Hypothetical protein.
     
 0.520
Your Current Organism:
Marinilactibacillus psychrotolerans
NCBI taxonomy Id: 191770
Other names: DSM 19582, IAM 14980, JCM 21451, M. psychrotolerans, Marinilactibacillus psychrotolerans Ishikawa et al. 2003, Marinolactobacillus psychrotolerans, NBRC 100002, NCIMB 13873, NRIC 0510, strain M13-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.