STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC23001.1Protein of unknown function. (233 aa)    
Predicted Functional Partners:
SDC26027.1
Uncharacterized protein YpiB, UPF0302 family; Belongs to the UPF0302 family.
  
     0.731
SDC84987.1
Superoxide dismutase, Cu-Zn family.
  
     0.711
SDC59197.1
Uncharacterized protein YpbB.
  
     0.703
SDB97330.1
Site-specific DNA-methyltransferase (adenine-specific).
  
     0.649
SDC26082.1
Tetratricopeptide repeat-containing protein.
  
     0.610
SDC22958.1
50S ribosome-binding GTPase.
       0.597
SDB97875.1
Septation ring formation regulator.
  
     0.574
SDC98286.1
Conserved hypothetical integral membrane protein.
  
     0.567
SDD13419.1
Glyoxylase, beta-lactamase superfamily II.
  
     0.557
SDC58887.1
Riboflavin biosynthesis RibT protein.
  
     0.553
Your Current Organism:
Marinilactibacillus psychrotolerans
NCBI taxonomy Id: 191770
Other names: DSM 19582, IAM 14980, JCM 21451, M. psychrotolerans, Marinilactibacillus psychrotolerans Ishikawa et al. 2003, Marinolactobacillus psychrotolerans, NBRC 100002, NCIMB 13873, NRIC 0510, strain M13-2
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