STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC59090.1Two-component system, OmpR family, sensor histidine kinase ResE. (603 aa)    
Predicted Functional Partners:
SDC59050.1
Two-component system, OmpR family, response regulator ResD.
 0.995
SDC52043.1
Two-component system, OmpR family, response regulator VicR.
 
 0.988
SDC82247.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.977
SDC32251.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
 0.972
SDC32886.1
Two-component system, OmpR family, KDP operon response regulator KdpE.
 
 0.961
SDC40301.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.905
SDC98076.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
 0.898
SDD17253.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.893
phoP
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP.
 
 0.877
SDC93484.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
 0.853
Your Current Organism:
Marinilactibacillus psychrotolerans
NCBI taxonomy Id: 191770
Other names: DSM 19582, IAM 14980, JCM 21451, M. psychrotolerans, Marinilactibacillus psychrotolerans Ishikawa et al. 2003, Marinolactobacillus psychrotolerans, NBRC 100002, NCIMB 13873, NRIC 0510, strain M13-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.