STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC76392.1Lactate oxidase. (373 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolysing).
  
 
 0.913
pyk
Pyruvate kinase.
  
 0.887
SDC77539.1
IMP dehydrogenase.
   
 
 0.867
spxB
Pyruvate oxidase.
 
 
 0.711
adhE
Acetaldehyde dehydrogenase / alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.619
SDC14352.1
L-lactate dehydrogenase.
   
 
 0.610
SDB97293.1
Acetate kinase.
     
 0.584
SDC08860.1
Aldehyde dehydrogenase (NAD+).
 
 
 0.558
SDC13625.1
Pyruvate carboxylase.
  
 
 0.549
pflB
Formate C-acetyltransferase.
     
 0.516
Your Current Organism:
Marinilactibacillus psychrotolerans
NCBI taxonomy Id: 191770
Other names: DSM 19582, IAM 14980, JCM 21451, M. psychrotolerans, Marinilactibacillus psychrotolerans Ishikawa et al. 2003, Marinolactobacillus psychrotolerans, NBRC 100002, NCIMB 13873, NRIC 0510, strain M13-2
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