Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDB97293.1 | SDC08860.1 | SAMN04488013_10183 | SAMN04488013_10246 | Acetate kinase. | Aldehyde dehydrogenase (NAD+). | 0.918 |
SDB97293.1 | SDC13625.1 | SAMN04488013_10183 | SAMN04488013_102132 | Acetate kinase. | Pyruvate carboxylase. | 0.670 |
SDB97293.1 | SDC76392.1 | SAMN04488013_10183 | SAMN04488013_10929 | Acetate kinase. | Lactate oxidase. | 0.584 |
SDB97293.1 | adhE | SAMN04488013_10183 | SAMN04488013_10341 | Acetate kinase. | Acetaldehyde dehydrogenase / alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | 0.952 |
SDB97293.1 | guaA | SAMN04488013_10183 | SAMN04488013_1108 | Acetate kinase. | GMP synthase (glutamine-hydrolysing). | 0.478 |
SDB97293.1 | pflB | SAMN04488013_10183 | SAMN04488013_10342 | Acetate kinase. | Formate C-acetyltransferase. | 0.631 |
SDB97293.1 | pyk | SAMN04488013_10183 | SAMN04488013_12720 | Acetate kinase. | Pyruvate kinase. | 0.760 |
SDB97293.1 | spxB | SAMN04488013_10183 | SAMN04488013_10541 | Acetate kinase. | Pyruvate oxidase. | 0.934 |
SDC08860.1 | SDB97293.1 | SAMN04488013_10246 | SAMN04488013_10183 | Aldehyde dehydrogenase (NAD+). | Acetate kinase. | 0.918 |
SDC08860.1 | SDC13625.1 | SAMN04488013_10246 | SAMN04488013_102132 | Aldehyde dehydrogenase (NAD+). | Pyruvate carboxylase. | 0.918 |
SDC08860.1 | SDC14352.1 | SAMN04488013_10246 | SAMN04488013_102146 | Aldehyde dehydrogenase (NAD+). | L-lactate dehydrogenase. | 0.550 |
SDC08860.1 | SDC76392.1 | SAMN04488013_10246 | SAMN04488013_10929 | Aldehyde dehydrogenase (NAD+). | Lactate oxidase. | 0.558 |
SDC08860.1 | SDC77539.1 | SAMN04488013_10246 | SAMN04488013_10953 | Aldehyde dehydrogenase (NAD+). | IMP dehydrogenase. | 0.533 |
SDC08860.1 | adhE | SAMN04488013_10246 | SAMN04488013_10341 | Aldehyde dehydrogenase (NAD+). | Acetaldehyde dehydrogenase / alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | 0.930 |
SDC08860.1 | guaA | SAMN04488013_10246 | SAMN04488013_1108 | Aldehyde dehydrogenase (NAD+). | GMP synthase (glutamine-hydrolysing). | 0.539 |
SDC08860.1 | pflB | SAMN04488013_10246 | SAMN04488013_10342 | Aldehyde dehydrogenase (NAD+). | Formate C-acetyltransferase. | 0.921 |
SDC08860.1 | pyk | SAMN04488013_10246 | SAMN04488013_12720 | Aldehyde dehydrogenase (NAD+). | Pyruvate kinase. | 0.940 |
SDC08860.1 | spxB | SAMN04488013_10246 | SAMN04488013_10541 | Aldehyde dehydrogenase (NAD+). | Pyruvate oxidase. | 0.611 |
SDC13625.1 | SDB97293.1 | SAMN04488013_102132 | SAMN04488013_10183 | Pyruvate carboxylase. | Acetate kinase. | 0.670 |
SDC13625.1 | SDC08860.1 | SAMN04488013_102132 | SAMN04488013_10246 | Pyruvate carboxylase. | Aldehyde dehydrogenase (NAD+). | 0.918 |
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