STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC78378.1Hypothetical protein. (344 aa)    
Predicted Functional Partners:
nsaR
Transcriptional regulatory protein, C terminal.
 0.998
SDC26263.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.968
SDC78303.1
Putative ABC transport system permease protein.
 
 
 0.967
SDC97872.1
Putative ABC transport system permease protein.
 
 0.924
SDD00159.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.909
SDD46598.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.909
SDC78343.1
Putative ABC transport system ATP-binding protein.
 
   
 0.905
SDC26213.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.899
SDC32886.1
Two-component system, OmpR family, KDP operon response regulator KdpE.
 0.896
SDC31416.1
Ribose-binding protein.
    
 0.888
Your Current Organism:
Marinilactibacillus psychrotolerans
NCBI taxonomy Id: 191770
Other names: DSM 19582, IAM 14980, JCM 21451, M. psychrotolerans, Marinilactibacillus psychrotolerans Ishikawa et al. 2003, Marinolactobacillus psychrotolerans, NBRC 100002, NCIMB 13873, NRIC 0510, strain M13-2
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.