STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC82089.1Protein of unknown function. (653 aa)    
Predicted Functional Partners:
SDC82128.1
Protein of unknown function.
 
     0.892
guaA
GMP synthase (glutamine-hydrolysing).
    
 0.887
SDD41634.1
N-acetylmuramoyl-L-alanine amidase.
    
 0.868
SDC02514.1
Nicotinamide-nucleotide amidase.
   
 
  0.851
SDC77539.1
IMP dehydrogenase.
    
  0.849
SDC82168.1
VTC domain-containing protein.
 
     0.838
SDD43079.1
Autophagy protein 16 (ATG16).
 
 
 0.709
tdk
Thymidine kinase.
 
  
 0.538
SDD19635.1
XTP/dITP diphosphohydrolase.
   
 0.535
SDC94598.1
Uncharacterized protein YjbI, contains pentapeptide repeats.
   
 
 0.520
Your Current Organism:
Marinilactibacillus psychrotolerans
NCBI taxonomy Id: 191770
Other names: DSM 19582, IAM 14980, JCM 21451, M. psychrotolerans, Marinilactibacillus psychrotolerans Ishikawa et al. 2003, Marinolactobacillus psychrotolerans, NBRC 100002, NCIMB 13873, NRIC 0510, strain M13-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.