STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC81879.1Hypothetical protein. (601 aa)    
Predicted Functional Partners:
SDC23185.1
Fibronectin/fibrinogen-binding protein; Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains.
  
  
 0.843
SDC81914.1
DNA adenine methylase.
  
    0.773
SDC52991.1
Type I restriction enzyme M protein.
  
    0.439
SDC53225.1
Type I restriction-modification system, DNA methylase subunit.
  
    0.439
Your Current Organism:
Marinilactibacillus psychrotolerans
NCBI taxonomy Id: 191770
Other names: DSM 19582, IAM 14980, JCM 21451, M. psychrotolerans, Marinilactibacillus psychrotolerans Ishikawa et al. 2003, Marinolactobacillus psychrotolerans, NBRC 100002, NCIMB 13873, NRIC 0510, strain M13-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.