STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC84336.1Glyoxylase, beta-lactamase superfamily II. (207 aa)    
Predicted Functional Partners:
gloB
Hydroxyacylglutathione hydrolase.
  
  
 
0.924
SDC69959.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
 0.922
SDC78055.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
 0.922
gloA3
Lactoylglutathione lyase.
    
 0.914
gloA
Lactoylglutathione lyase.
    
 0.914
yyaH
Lactoylglutathione lyase.
     
 0.911
SDC71526.1
D-lactate dehydrogenase.
   
 
 0.906
SDD01585.1
D-lactate dehydrogenase.
   
 
 0.906
SDC69911.1
Rhodanese-related sulfurtransferase.
  
 0.649
SDC70007.1
Rhodanese-related sulfurtransferase.
  
 0.649
Your Current Organism:
Marinilactibacillus psychrotolerans
NCBI taxonomy Id: 191770
Other names: DSM 19582, IAM 14980, JCM 21451, M. psychrotolerans, Marinilactibacillus psychrotolerans Ishikawa et al. 2003, Marinolactobacillus psychrotolerans, NBRC 100002, NCIMB 13873, NRIC 0510, strain M13-2
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.