STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC87200.1Activator of the mannose operon, transcriptional antiterminator. (498 aa)    
Predicted Functional Partners:
SDD07456.1
Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type).
 
 
  0.981
SDC87249.1
PTS system unknown substrate IIA component, Fru family (TC 4.A.2.1.9).
    0.957
SDC14656.1
PTS system, mannitol-specific IIC component.
 
 
 0.926
SDC51986.1
PTS system, glucose-specific IIA component.
  
 
 0.902
SDC14759.1
PTS system, mannitol-specific IIA component.
 
 
 0.899
SDC14803.1
Mannitol-1-phosphate 5-dehydrogenase.
 
 
 0.850
SDD07354.1
PTS system, ascorbate-specific IIC component.
 
 
 0.828
SDC54869.1
PTS system IIC component, L-Asc family.
 
 
 0.817
SDC87290.1
PTS system, fructose-specific IIB component.
  
 
 0.766
SDC54821.1
PTS system, ascorbate-specific IIB component.
 
 
 0.711
Your Current Organism:
Marinilactibacillus psychrotolerans
NCBI taxonomy Id: 191770
Other names: DSM 19582, IAM 14980, JCM 21451, M. psychrotolerans, Marinilactibacillus psychrotolerans Ishikawa et al. 2003, Marinolactobacillus psychrotolerans, NBRC 100002, NCIMB 13873, NRIC 0510, strain M13-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.