STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC90060.1Heparinase II/III-like protein. (571 aa)    
Predicted Functional Partners:
SDC90097.1
Hypothetical protein.
 
     0.943
SDC90136.1
Unsaturated chondroitin disaccharide hydrolase.
 
     0.923
SDC90013.1
Hypothetical protein.
 
     0.792
SDC90177.1
Beta-galactosidase.
 
 
 0.774
SDC89823.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
    0.691
SDC89970.1
Uncharacterized membrane protein YesL.
 
    0.593
SDD31671.1
Arylsulfatase A.
 
  
  0.578
SDD29426.1
Beta-galactosidase.
 
 
 0.561
SDC94548.1
Beta-L-arabinofuranosidase, GH127.
 
     0.535
SDC71348.1
Protein of unknown function.
 
  
 0.493
Your Current Organism:
Marinilactibacillus psychrotolerans
NCBI taxonomy Id: 191770
Other names: DSM 19582, IAM 14980, JCM 21451, M. psychrotolerans, Marinilactibacillus psychrotolerans Ishikawa et al. 2003, Marinolactobacillus psychrotolerans, NBRC 100002, NCIMB 13873, NRIC 0510, strain M13-2
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